Author

Barry Ng

Publication Date

Spring 2025

Degree Type

Master's Project

Degree Name

Master of Science in Computer Science (MSCS)

Department

Computer Science

First Advisor

Philip Heller

Second Advisor

Nada Attar

Third Advisor

Maya deVries

Keywords

Mask R-CNN, computer vision, autonomous reef monitoring structures, machine learning, histogram equalization, segmentation

Abstract

Sponges play a vital role in marine ecosystems, being the only organisms capable of converting dissolved organic matter (DOM) into particulate organic matter (POM). They provide nutrients for coral reefs to thrive in oligotrophic waters. Autonomous reef monitoring structures (ARMS) are used to measure the biodiversity of coral reefs by simulating the complex cavities inside reef structures. Organisms settle on them and scientists can retrieve them after a period of time for analysis. Images are taken of ARMS plates after they are retrieved. Human analysis is unsuitable for the analysis of ARMS plates due to the huge number of images. Computer vision is leveraged to automate the process using machine learning models such as Mask R-CNN. A possible improvement is to preprocess the images using histogram equalization before training the model.

Available for download on Monday, May 25, 2026

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